Modern cryptography based on computational complexity theory is mainly constructed with silicon-based circuits. As DNA nanotechnology penetrates the molecular domain, utilizing molecular cryptography for data access protection in the biomolecular domain becomes a unique approach to information security. However, building security devices and strategies with robust security and compatibility is still challenging. Here, this study reports a time-controlled molecular authentication strategy using DNAzyme and DNA strand displacement as the basic framework. A time limit exists for authorization and access, and this spontaneous shutdown design further protects secure access. Multiple hierarchical authentications, temporal Boolean logic authentication, and enzyme authentication strategies are constructed based on DNA networks'good compatibility and programmability. This study gives proof of concept for the detection and protection of bioinformation about single nucleotide variants and miRNA, highlighting their potential in biosensing and security protection. The research demonstrates a time-controlled molecular authentication strategy using DNAzyme and DNA strand displacement as the basic framework. Multiple hierarchical authentication, temporal Boolean logic authentication, and enzyme authentication strategies are constructed based on DNA networks' compatibility and programmability. Proof of concept for the detection and protection of bioinformation about single nucleotide variants and miRNA highlights their potential in biosensing and security protection. image